PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY67774.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 417aa MW: 47084.7 Da PI: 5.5168

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY67774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.7	1.5e-05	3	35	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 r C+ ++e++ + +C+++ +lC +C ++H+ TEY67774.1 3 RLCDFCGEQRSIVHCRSDAACLCLSCDRNIHSA 35 68*****************************54 PP
2	zf-B_box	19.5	2e-06	47	89	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 C+++++++++ C + ++ lC+dC ++H + H+++ TEY67774.1 47 LCERCHSQPAITRCIQESTSLCQDCNWSGHVSappsdveHKRQ 89 7*****************************7677777777765 PP
3	CCT	66.8	6.1e-23	360	403	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a+lRYkeKrk+RkF+KkirY+sRK++A+ R+RvKGrFvk+ TEY67774.1 360 RDDAVLRYKEKRKSRKFDKKIRYASRKERADVRKRVKGRFVKAG 403 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MGRLCDFCGE QRSIVHCRSD AACLCLSCDR NIHSANALSK RHLRTLLCER CHSQPAITRC 60 IQESTSLCQD CNWSGHVSAP PSDVEHKRQM INLYSGCPSA ADFSRIWSFF SVDKSITNPE 120 PDPMNLETPS RCELSHADFC TEDTGMEIVA PEAEQFDGKE PVDSMNPKGK RFLEMIVSVI 180 RSDSPAFMLF WLLLRLVESS FMKACSPKKD PGPTQETPCQ NFYISDTELS LDDYEALFDE 240 SRDETQQFLD NGGADSFYGM RDMYDNECNV KGVTTKASSS KVETLKQNCT TSNQLSAESL 300 TSCKSDSNDC VPRPAQSTHS ISFSGQTTEC NTRDLPESGG FSTVIMEEHQ YDIQFSSAVR 360 DDAVLRYKEK RKSRKFDKKI RYASRKERAD VRKRVKGRFV KAGDPYDYDP LDVIRNQ

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MGRLCDFCGE QRSIVHCRSD AACLCLSCDR NIHSANALSK RHLRTLLCER CHSQPAITRC  60
IQESTSLCQD CNWSGHVSAP PSDVEHKRQM INLYSGCPSA ADFSRIWSFF SVDKSITNPE  120
PDPMNLETPS RCELSHADFC TEDTGMEIVA PEAEQFDGKE PVDSMNPKGK RFLEMIVSVI  180
RSDSPAFMLF WLLLRLVESS FMKACSPKKD PGPTQETPCQ NFYISDTELS LDDYEALFDE  240
SRDETQQFLD NGGADSFYGM RDMYDNECNV KGVTTKASSS KVETLKQNCT TSNQLSAESL  300
TSCKSDSNDC VPRPAQSTHS ISFSGQTTEC NTRDLPESGG FSTVIMEEHQ YDIQFSSAVR  360
DDAVLRYKEK RKSRKFDKKI RYASRKERAD VRKRVKGRFV KAGDPYDYDP LDVIRNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-78	CO-like family protein