PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY67815.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 173aa MW: 19323 Da PI: 5.2836

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY67815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.2	6.6e-55	45	149	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ++++tdfknh+lPlarikki+kadedv+misaeaPv+++k ce+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflvdi+ TEY67815.1 45 QLQAFWANQmqeVDQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKVCEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 143 89****96666899******************************************************************************* PP NF-YC 97 prdelk 102 prdelk TEY67815.1 144 PRDELK 149 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MDHSDQRQQP GVGAAAGRGS MAYPTAPYQT VSSPTSFAPQ QQQQQLQAFW ANQMQEVDQT 60 TDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVIFAKVCEM FILELTLRSW IHTEENKRRT 120 LQKNDIAAAI SRTDVFDFLV DIIPRDELKE EGLGITKAAI PLVGSAPDAL RPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	124	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	4e-71	NF-YC family protein