PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY68540.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MYB_related
Protein Properties Length: 272aa    MW: 30718 Da    PI: 9.0296
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY68540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.2e-124892147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       TEY68540.1 48 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 92
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MFSLNTNQTK GFFLDRDGMA LPNIGLFSSP AEDPNKKIRK PYTITKSRES WTEPEHDKFL  60
EALQLFDRDW KKIEAFIGSK TVIQIRSHAQ KYFLKVQKSG TNEHLPPPRP KRKAAHPYPQ  120
KASKIVPVLS QERPSFQDSA AVPDNGFARR PVPSAIIRNE SAASIPGWTE KPLQKTNILH  180
AAGVLPDFGQ VYSFIGSVFD PNVTGHLQKL KKMDPIDIET VLLLMRNLSI NLASRDFEDH  240
RRVLSSYEID RERDDAFDVT DSILCCESEG AG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-91MYB_related family protein