PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY68570.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 453aa    MW: 49264.7 Da    PI: 7.3709
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY68570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.64.9e-09113133425
                 ---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                 ++C+++ + G C+yGd+CkF H
  TEY68570.1 113 KICSYWVQ-GSCRYGDTCKFLH 133
                 68******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MDADGGRRIF NRLGPSSSSD SNGRQQKVCF HWEKGKCTRN PCPFLHGELP TAANGKRGHQ  60
GFGAEDNYRG GGGLRRSGNY NFNNSNHNNS WGRPQSQQPV SGNRTFVRKV EKKICSYWVQ  120
GSCRYGDTCK FLHQCALLGA GLCFLADLVF ELFSSLLVKV ALDKIFACQA VTGITLPSGS  180
DKLYSGSEDE TVRIWDCQSG QLAGVVNMGC SVGCMLSEGP WVFVGLTNLV KAWNIQTSME  240
LSLSGPVGQV YSLVVGNDLL FAGNKDGSIL AWKFNAVTNC FEPAASLLGH TLAVVTLVVG  300
GNRMYSGSMD HTIRVWSLET MQCIQTLTGH NHVVTSVLCW DQFLLSASLD NTVKVWAATE  360
AGNLEVTFTH TEEQGLITLC GMHDSESKPV LLCSCNDNSV RVYDLPSFSE RGKIFSKEEV  420
RSIQIGPGGL FFTGDGSGQV RVWKWSAEST ATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein