PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY68685.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 235aa MW: 26892.6 Da PI: 8.4721

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY68685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.8	3.5e-29	18	68	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCda+v +i+fs++gkl+ey++ TEY68685.1 18 KRIENKINRQVTFSKRRSGLLKKAHEISILCDADVGLIVFSTRGKLFEYAT 68 79***********************************************86 PP
2	K-box	15.2	9.1e-07	119	151	68	100
K-box 68 kKnellleqieelqkkekelqeenkaLrkklee 100 + n+l+ e+i elqkk k+lqe+n+ L kk++e TEY68685.1 119 RWNQLMNESILELQKKDKALQEQNNILAKKIKE 151 779***************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MYMETSEREM GRGRVQLKRI ENKINRQVTF SKRRSGLLKK AHEISILCDA DVGLIVFSTR 60 GKLFEYATDS CMERILERYE RCSYAERQLK EPDFESPVSW TLEHAKLKGR VEVLQRNQRW 120 NQLMNESILE LQKKDKALQE QNNILAKKIK EREKEMAASA AAATAATTAA MEQQQNHDLN 180 SSGFGLSQHM GTLNVRNEIY PIEGENGEAT AGATLHKNQF SNPIIPSWML HHIDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	8e-72	MIKC_MADS family protein