PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY68763.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 1922aa MW: 216598 Da PI: 5.3569

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY68763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	103.7	1.6e-32	1646	1747	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal..peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rr+C+++C la fpa++pk f+nvh+lFG++n+++llk+l +++++ +am+s+ y+A +r + Pv G++ i++l+ q++++++el+ TEY68763.1 1646 ACAACKYQRRRCTPECLLASFFPADEPKMFQNVHRLFGVKNIQNLLKELgpDHTQKAIAMKSIKYHAAMRDKYPVWGCMFEIHQLTYQIQHAEEELQ 1742 7**********************************************744445899************************************9 PP DUF260 96 llkee 100 ++ ++ TEY68763.1 1743 AVLHQ 1747 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1922 aa Download sequence
MGHKKRNVAP RSKPPPSAAD DASAAAGGGG DSILDNSPNP SVTALAKSEP VVELEEIEPY 60 ASIKPECERA LTALRRGNHT RALRSMKDLC SRHENSADAA LIHRVQGTIC VKVASIVDDP 120 NAKQRYLKNA IESARKAVNL CPNSVEFAHF YANLLYEAAN EGKEYEEVVQ ECERALSIEN 180 PVDPAKESLQ AENLQKISTA EARVANVQSE LKALIQKSNI ASISTWMKHL SNGEEKFRLI 240 PIRRMPEDPL EVRLIQAKRP NEIKKVAKTE EERRKEVEVR VAAARLLQQK SESPSLGNDG 300 DSINNNGKGV DSSSGTGQRA GERRRYGNSR RIASSDERRD SVRTYWNSMS LDAKKDLLKI 360 EISELKAHFS SLKDVSPSEV LNEALSFGVT NKMWKFWSCC RCNEKFADVV LFMQHAVEEH 420 MSSLLPKMHS ILPQCVEDEL AEMLLNCSWK PLELNTAIRM HRPQSTLEAP DFFEESYSSH 480 GINGSKECFV DTYSNEYDWD SSLRNKRSGG NFNHGVEDGR DFEDVKWMDC DGDLSSKESL 540 LNENWPLSDD PERAKLLEKI QVIFQSLIKN KCLASSHLSK VIHFAVEELQ TLACGSQLLS 600 SNLEKTPLCI CFLGAPELKK ILKFLQEIAN SCGLSRYSDK SNSEDNSKTV MNGVDFVEKI 660 NFSQDASFLI LDEHFLPCKV PRPSSDGTVN CSRVETSSHV NYDNGIILDS DALLSWIFKG 720 PSSGEQLTSW MRAKEEKAQQ GLEILQLLEK EAYHLQSLCD RKSEQLNYEE ALQAVEDLCL 780 EEGKRREHVT DFTGHSYDSV LRRRQEELGD NENENDMAFM SNRFESQAIK NVLKDAESLN 840 INQFGFEETY SGVRSHLCDL ESGEDDDWRR KDYLHQVDSC IEVAIQRQKE HGSLEISKLD 900 ARLMRILIGM QKLEIELDPA SSHDYCSILI PLLKSFLRAR LEDMAEKDAR EKSDAAREAF 960 LAELALDSKK GTTAGLENSK HEKSKDKKKS KEGRKNKDLK ASHWDDPDDQ ISEEILLPSA 1020 HDEEVVCSEL ANNGTNDALR LQEEEYKHKI ELEAEERKLE ETLEYQRRIE NEAKQKQLAE 1080 QHKRNSKVAG EKAKPISISD SYIRCNDGEK DVNDQWTNRK ESLIQKVAFT ESVLNDSANG 1140 AVMQNGFSNG AIPQEGVIFT ERRSGKRGKR HKGLNKLSDR KSPPLTSEKE DNGSVMPRDE 1200 LNSHGDGDKG GKTLRQLSAE EDDEERFQAD LKKAVRESLG VSSLSISLAD GDGYGYPCNI 1260 NMGHLDTLHA PKKLPAKSSL ALPHKEIPET GDSRLLCGEG ATDVNGMDTY GTGLKNEVGE 1320 YNCFLNVIIQ SLWHLRRFRD EFMRRSVSEH VHVGDPCVVC ALYEIFIALS MVSKDNHREP 1380 VAPTSLRVAL SNLYPDSNFF QEGQMNDASE VLGVIFNCLH RSFTPGPHAS DVEPLNRSGT 1440 DSWDCTNASC IAHSLFGMNI SERMDCYNCS LESRCLKYTS FFHNINASAV MCPESSFDEL 1500 LYMVEMNHQL ACDPEDGGCG KLNYIHHILS SPPHVFTTVL GWQNTCESVD DIMGTLAALS 1560 TEIDISVLYR GLDPKHKRHL VSVVCYYGQH YHCFAYSSDH EQWIMYDDKT VKVIGGWSDV 1620 LAMCERGHLQ PQVLLRMTIK NGSGQACAAC KYQRRRCTPE CLLASFFPAD EPKMFQNVHR 1680 LFGVKNIQNL LKELGPDHTQ KAIAMKSIKY HAAMRDKYPV WGCMFEIHQL TYQIQHAEEE 1740 LQAVLHQLAF YRQQQQQQQQ QHENQLSSHT ADDYISDLQL GMGPPGNSLE AHSHYNNNEE 1800 AAVADYNINY MDFKEMNNVV NSMCGYSNSN SNENNMNSIL AHAHLMMQQP PISTVEHEDY 1860 NEMQPFFDNI DDSQSYIGSK EAYDQSSLSL ESAFKKSRHD VEEINENELK NAAACFSLTS 1920 VN

Sequence ? help Back to Top

Protein Sequence Length: 1922 aa Download sequence

MGHKKRNVAP RSKPPPSAAD DASAAAGGGG DSILDNSPNP SVTALAKSEP VVELEEIEPY  60
ASIKPECERA LTALRRGNHT RALRSMKDLC SRHENSADAA LIHRVQGTIC VKVASIVDDP  120
NAKQRYLKNA IESARKAVNL CPNSVEFAHF YANLLYEAAN EGKEYEEVVQ ECERALSIEN  180
PVDPAKESLQ AENLQKISTA EARVANVQSE LKALIQKSNI ASISTWMKHL SNGEEKFRLI  240
PIRRMPEDPL EVRLIQAKRP NEIKKVAKTE EERRKEVEVR VAAARLLQQK SESPSLGNDG  300
DSINNNGKGV DSSSGTGQRA GERRRYGNSR RIASSDERRD SVRTYWNSMS LDAKKDLLKI  360
EISELKAHFS SLKDVSPSEV LNEALSFGVT NKMWKFWSCC RCNEKFADVV LFMQHAVEEH  420
MSSLLPKMHS ILPQCVEDEL AEMLLNCSWK PLELNTAIRM HRPQSTLEAP DFFEESYSSH  480
GINGSKECFV DTYSNEYDWD SSLRNKRSGG NFNHGVEDGR DFEDVKWMDC DGDLSSKESL  540
LNENWPLSDD PERAKLLEKI QVIFQSLIKN KCLASSHLSK VIHFAVEELQ TLACGSQLLS  600
SNLEKTPLCI CFLGAPELKK ILKFLQEIAN SCGLSRYSDK SNSEDNSKTV MNGVDFVEKI  660
NFSQDASFLI LDEHFLPCKV PRPSSDGTVN CSRVETSSHV NYDNGIILDS DALLSWIFKG  720
PSSGEQLTSW MRAKEEKAQQ GLEILQLLEK EAYHLQSLCD RKSEQLNYEE ALQAVEDLCL  780
EEGKRREHVT DFTGHSYDSV LRRRQEELGD NENENDMAFM SNRFESQAIK NVLKDAESLN  840
INQFGFEETY SGVRSHLCDL ESGEDDDWRR KDYLHQVDSC IEVAIQRQKE HGSLEISKLD  900
ARLMRILIGM QKLEIELDPA SSHDYCSILI PLLKSFLRAR LEDMAEKDAR EKSDAAREAF  960
LAELALDSKK GTTAGLENSK HEKSKDKKKS KEGRKNKDLK ASHWDDPDDQ ISEEILLPSA  1020
HDEEVVCSEL ANNGTNDALR LQEEEYKHKI ELEAEERKLE ETLEYQRRIE NEAKQKQLAE  1080
QHKRNSKVAG EKAKPISISD SYIRCNDGEK DVNDQWTNRK ESLIQKVAFT ESVLNDSANG  1140
AVMQNGFSNG AIPQEGVIFT ERRSGKRGKR HKGLNKLSDR KSPPLTSEKE DNGSVMPRDE  1200
LNSHGDGDKG GKTLRQLSAE EDDEERFQAD LKKAVRESLG VSSLSISLAD GDGYGYPCNI  1260
NMGHLDTLHA PKKLPAKSSL ALPHKEIPET GDSRLLCGEG ATDVNGMDTY GTGLKNEVGE  1320
YNCFLNVIIQ SLWHLRRFRD EFMRRSVSEH VHVGDPCVVC ALYEIFIALS MVSKDNHREP  1380
VAPTSLRVAL SNLYPDSNFF QEGQMNDASE VLGVIFNCLH RSFTPGPHAS DVEPLNRSGT  1440
DSWDCTNASC IAHSLFGMNI SERMDCYNCS LESRCLKYTS FFHNINASAV MCPESSFDEL  1500
LYMVEMNHQL ACDPEDGGCG KLNYIHHILS SPPHVFTTVL GWQNTCESVD DIMGTLAALS  1560
TEIDISVLYR GLDPKHKRHL VSVVCYYGQH YHCFAYSSDH EQWIMYDDKT VKVIGGWSDV  1620
LAMCERGHLQ PQVLLRMTIK NGSGQACAAC KYQRRRCTPE CLLASFFPAD EPKMFQNVHR  1680
LFGVKNIQNL LKELGPDHTQ KAIAMKSIKY HAAMRDKYPV WGCMFEIHQL TYQIQHAEEE  1740
LQAVLHQLAF YRQQQQQQQQ QHENQLSSHT ADDYISDLQL GMGPPGNSLE AHSHYNNNEE  1800
AAVADYNINY MDFKEMNNVV NSMCGYSNSN SNENNMNSIL AHAHLMMQQP PISTVEHEDY  1860
NEMQPFFDNI DDSQSYIGSK EAYDQSSLSL ESAFKKSRHD VEEINENELK NAAACFSLTS  1920
VN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	3e-37	LBD family protein