PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY68800.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 428aa MW: 47887.4 Da PI: 5.4217

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY68800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27.5	6.4e-09	18	60	4	40
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r C+ + +k+++++C+ ++ +lC++C ++ H+ H++v TEY68800.1 18 RACDSCVRKRASWYCTADDAFLCQSCDSTVHSAnplarrHERV 60 68*****************************657888888876 PP
2	CCT	67.6	3.3e-23	372	415	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a TEY68800.1 372 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 415 9*****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MVSSDKKLAN VVGGKSIRAC DSCVRKRASW YCTADDAFLC QSCDSTVHSA NPLARRHERV 60 CLKTVLPSVK PFDRGLRISV PSWHQGFTRK ARTPRKGKHT KCGPTDGRFL STDRTHNHLV 120 PEISGEENSH DDEQLLYRVP IFDPSVAELC ISVNSNEAVV GNPNDGEITP GSAPGFDGFL 180 PSELDLAEFA ADVESLLGKG LDEEAFDIEG LGILDDERKR ERERESGLGS EKVKVEHDEE 240 IDHLNIDGEY IGVGRETFEL NFAYDSPING EDEELDTKEI SMEQIFGSNF EDSNKVFDHD 300 EDDAKKIFLR LNYEGILSAW DEESPWTTGE RPKVNPNDWL SDFVGTCGAV HVYGDIGMMG 360 GQQARAGGDG GREARVSRYR EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKRANFVAS 420 AALALINK

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MVSSDKKLAN VVGGKSIRAC DSCVRKRASW YCTADDAFLC QSCDSTVHSA NPLARRHERV  60
CLKTVLPSVK PFDRGLRISV PSWHQGFTRK ARTPRKGKHT KCGPTDGRFL STDRTHNHLV  120
PEISGEENSH DDEQLLYRVP IFDPSVAELC ISVNSNEAVV GNPNDGEITP GSAPGFDGFL  180
PSELDLAEFA ADVESLLGKG LDEEAFDIEG LGILDDERKR ERERESGLGS EKVKVEHDEE  240
IDHLNIDGEY IGVGRETFEL NFAYDSPING EDEELDTKEI SMEQIFGSNF EDSNKVFDHD  300
EDDAKKIFLR LNYEGILSAW DEESPWTTGE RPKVNPNDWL SDFVGTCGAV HVYGDIGMMG  360
GQQARAGGDG GREARVSRYR EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKRANFVAS  420
AALALINK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	383	399	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	3e-88	CO-like family protein