PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY68869.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 143aa MW: 16469.6 Da PI: 5.06

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY68869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.2e-18	61	115	1	55
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rrk+ ++ k+q ++Le+ F +n++++++e+e LA++l+L+ rqV vWFqNrRa++ TEY68869.1 61 RRKKLRLAKDQSRRLEQSFLQNQTLNHKEKEALAMELRLNPRQVEVWFQNRRARY 115 799999***********************************************96 PP
2	HD-ZIP_I/II	72.4	9e-24	62	115	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+k+q++ LE+sF ++++L++++K++la eL+l+prqv+vWFqnrRAR+ TEY68869.1 62 RKKLRLAKDQSRRLEQSFLQNQTLNHKEKEALAMELRLNPRQVEVWFQNRRARY 115 69***************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MEILPPNSTC LELSIAMPGF SSFPSSEAKG EIKLLDINEA PSRSEEECVV DEDEVGGGPV 60 RRKKLRLAKD QSRRLEQSFL QNQTLNHKEK EALAMELRLN PRQVEVWFQN RRARYSIIYF 120 TIIIWENENN ICGNVNNYGN IDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	90	RRKKLRLAKDQSRRLEQSFLQNQTLNHKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	6e-29	HD-ZIP family protein