PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY69701.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 217aa    MW: 24268.3 Da    PI: 8.3782
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY69701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.12.3e-064363526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C+ f++ G+C  Gd C F+Hg
  TEY69701.1 43 ACPEFRK-GHCGKGDACEFSHG 63
                7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MYEFKVRKCN RSRSHDWTDC PFAHPGEKVR RRDPRRFQYS GTACPEFRKG HCGKGDACEF  60
SHGVFECWLH PSRYRTEGCK DGKGCKRKVC FFAHSSRQLR IVPDSDASPA TADKKSAVGH  120
HCCLYCHCSM NALAELMASF EAMSPSRTAG GLPWLDVNFN VEESQLVMSP STPVRRGHSK  180
FYSGESKFSP VEYSGRNLTD DGGSGGPDLG WVNDLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.15e-66C3H family protein