PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY69811.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 943aa    MW: 104197 Da    PI: 6.2536
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY69811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23188289199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  TEY69811.1 188 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDKNQL 282
                 99*****************************8544444..48************************************************..7888889 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY69811.1 283 LLGIRRA 289
                 ****997 PP
2Auxin_resp111.48.9e-37314397183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t s ++++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dp rW nS+Wrs+k
  TEY69811.1 314 AAHAAATYSRYTIFYNPRASPSEFVIPLAKYIKAVHhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPARWLNSHWRSVK 397
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 943 aa     Download sequence    
MNLSGSPFSF SSFNKITAVG CDDAAFLSRD FDDWSDMISS CVAICSKPGE LRGESCSDRA  60
PDGLWSRRFQ SPEGGEKSCL NSELWHACAG PLVSLPSVGS HVVYFPQGHS EQVAVSTNKE  120
VDSQMPNYQS LPAQLICQLH NVTMHADIET DEVYAQMTLQ PLNAQEQKDI SFHPADLGAA  180
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA RDLHNNEWKF  240
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNDKN QLLLGIRRAN RPQTVMPSSV  300
LSSDSMHLGL LAAAAHAAAT YSRYTIFYNP RASPSEFVIP LAKYIKAVHH TRVSVGMRFR  360
MLFETEESSV RRYMGTITGI SDSDPARWLN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  420
TTFPMYHSAF PLRLKRPWPS GLPSYAGMKA SEMEFNPSLM WLRGDGGMQC LNQGMGVTPW  480
MQPRFDMSML GMQNDIYQAM SAAAMQDMRV VDPSQQMLSS VMQFQHPQSV GSGSAGYMQQ  540
SHCSAPFVQS LQGHSQAMSH SDLLQRQLLR QNSFNDAQIQ QRQQQHGNQT QHDIDPQQSQ  600
LSSNSQLQSP TMHSMSSMNQ SFSESNVKPV GNMSSPLHSL LSSVTQDEAS NVLNVLRSSN  660
LLSSSGWPTK RVALDPLSSS LSSQSITPQA DQLGLSNAYT TSNPVSLPPF PGRECLMGQE  720
ANNDPHNNFL FGVNIDSSSL LMPNGMPNLK AVVSDSDNVT MAFASSSYMT SSGADYQLNP  780
TVTSSSCIDD SGLLMPTENR GNSNTPDRTF VKVHKFGSFG RSLDITKFSS YPELRSELAQ  840
MFGLEGELED PLRSGWQLVF VDRENDVLLL GDDPWQEFVN SVWCIKILSP KEVQEMGKPG  900
LELLNSVPLQ RLPVLNGSCD GYGNRQEARN VSTGIPSVGS LDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein