PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY69936.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 261aa MW: 29082.7 Da PI: 6.0186

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY69936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.1	3.5e-55	75	179	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q i+++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflvdi+ TEY69936.1 75 QLQAFWASQmqeIDQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 173 89***99777889******************************************************************************** PP NF-YC 97 prdelk 102 prdelk TEY69936.1 174 PRDELK 179 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MDHSDQRQQH LAHPNQQQQA GGGSMAYATP PYQTAPMVAT GTPAGTVSSP TSFTPQQQLA 60 YHQAQQFLSQ QQQQQLQAFW ASQMQEIDQT TDFKNHSLPL ARIKKIMKAD EDVRMISAEA 120 PVIFAKACEM FILELTLRSW IHTEENKRRT LQKNDIAAAI SRTDVFDFLV DIIPRDELKE 180 EGLGITKAAI PLVGSAPDQL PYYYVHPQAP VGAPPGMIMG KPIDQAALYG AQQHQPPPPY 240 MQWPQSHPSQ QPSSQEQQSD S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	2e-73	NF-YC family protein