PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY70075.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 249aa MW: 28078.9 Da PI: 4.7869

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY70075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	112.6	2.8e-35	4	103	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk l r+C++dC++ pyfpa++pkkf nvh++FGa+nv+k+lk+l++++re+a++sl+yeAe +rdPv+G ++ i +l+q+++q++a+++ +k+ TEY70075.1 4 RCAACKCLCRECTEDCPMEPYFPADDPKKFSNVHEVFGATNVSKVLKELEPSQREAAANSLAYEAEHLLRDPVHGYLRQIYSLKQKINQVHADMENTKK 102 6*********************************************************************************************99998 PP DUF260 100 e 100 e TEY70075.1 103 E 103 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MRSRCAACKC LCRECTEDCP MEPYFPADDP KKFSNVHEVF GATNVSKVLK ELEPSQREAA 60 ANSLAYEAEH LLRDPVHGYL RQIYSLKQKI NQVHADMENT KKELAAYIGP SAYQPMLLSQ 120 PQQHLVIPAQ EQEITAIGRG CGSNDASDQH QHEHDRLDPL FLQQLQHLQD YFEAQQLAQM 180 HDFIPEVFAS TLFEIPCNGS LPPPLWKMVI SVEVLASMED YTTVSEGGGK EVGEFIIIVA 240 SCTLWLLQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-42	LBD family protein