PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY70490.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 257aa    MW: 29208.4 Da    PI: 6.8898
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY70490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003586108123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C + Fs++  L  H++ H
  TEY70490.1  86 FTCSFCWREFSTSQALGGHQNAH 108
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MASLEPCHSE ASNISVTSKN NHTIKEEEDE EDESGTKHET MSRVVLDLRP ANNEVRDKGN  60
PKNSKLHELN LFNPSDDPKP SRSKTFTCSF CWREFSTSQA LGGHQNAHKQ ERALAKHRHN  120
MVDLGPDAHP PMQGYSYYPL STTHMPIFRS HGFRAQSNMI HPKPYPYHHA PPLLPSQYAY  180
SVPREKMPRP YLIDPSPSTP DYALKLENFP SRDYKFNFGV INPNSSTRTN EGDDNRLRLG  240
NVDDGKDDLG LDLDLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.12e-17C2H2 family protein