PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71025.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 222aa MW: 25108.1 Da PI: 8.8602

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	105.1	5.7e-33	9	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCa+Ck++r++C+++C+lap fp e++++f++vhk+FG+snv+k++++l+ee+r+ a++slv+eA r++dPv G +g ++++ ++l+ k++ ++ ++ TEY71025.1 9 ACASCKHQRKRCTEKCTLAPFFPVERTREFQAVHKVFGVSNVTKIITSLREEDRKVAVDSLVWEAIGRQKDPVLGPFGDYRRVCEELRLYKSQYQHFHH 107 7******************************************************************************************99999888 PP DUF260 100 e 100 + TEY71025.1 108 Q 108 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MQRANNTSAC ASCKHQRKRC TEKCTLAPFF PVERTREFQA VHKVFGVSNV TKIITSLREE 60 DRKVAVDSLV WEAIGRQKDP VLGPFGDYRR VCEELRLYKS QYQHFHHQAP NQGTIVYKAA 120 TAQALMGWNN SNKIVNTNTN NPNNNFIGNG NSVVDFCTYG YSPNHHIHQD SGKQRAEREN 180 GTTIFLPQQH LSNAFGQQCI LAGQYNPLDS KSMESTLWEG SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	5e-46	LBD family protein