PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY71070.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 288aa    MW: 32990.7 Da    PI: 10.1291
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY71070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF978e-314493150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+
  TEY71070.1 44 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 93
                79***********************************************8 PP
2K-box516.4e-1815520748100
       K-box  48 lkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 l+eL+++e ++ek++++iR+kKne+l+++ie +qk+e el+++n++Lr+k+ e
  TEY71070.1 155 LQELRNMEGKVEKAISRIRTKKNEMLFAEIELMQKRELELHNANMYLRAKIGE 207
                 79************************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MIPYLKKSTS LQLVLPVFVM EFLSQESESS NSVRKNGRGK IQIKRIENTT NRQVTFCKRR  60
NGLLKKAYEL SVLCDAEVAL VVFSTRGRLY EYANNSVRAT IDRYKKATVD SSNTMSTSEA  120
NTQAILPARS HQAPQTNKRN SEFKQVAIKS ALYALQELRN MEGKVEKAIS RIRTKKNEML  180
FAEIELMQKR ELELHNANMY LRAKIGESER AQQQMNMMNQ EYEQPSMSSH NYDVRNFLPV  240
NLLQPEHDRH YSCQDQTPLQ LVSLLTVTSP GFGIKNFSCH GISKTKNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.19e-85MIKC_MADS family protein