PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71872.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 490aa MW: 52829.3 Da PI: 7.991

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	189	232	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e TEY71872.1 189 DPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVE 232 79***************************************998 PP
2	QLQ	58.2	2.5e-20	123	159	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q++ L++Q+l+yK+++an+PvP++Ll+++++ TEY71872.1 123 GPFTPSQWMDLEHQALIYKHIVANVPVPSNLLAPLKR 159 59********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MDFGVLSHKQ NAGSLPSAEP RDEHGHESVN QRSQDCWKSH KILKPSQPDF SPKMASDAYA 60 AFGRSNLWPP PPDDGQKMLS FSSPAPPDAA ASARSIAFSI CQDQANAGNG GSGLRGSFSR 120 LKGPFTPSQW MDLEHQALIY KHIVANVPVP SNLLAPLKRS LYSYGSPASY ASNFLGWGGF 180 HLGFSGSNDP EPGRCRRTDG KKWRCSRDAV PDQKYCERHI NRGRHRSRKP VEGHTGHAVS 240 GSAASKVASV ASSSSASAMS TSNVSNSLSA MQHQLNSLQP NAASADHLVS RAQDVRGLSL 300 LPPTIGAKSK DAPYTIQKQH FPFEESSHLE FGSVSSDCLL NPSEKISYMN GSNSDSFNTK 360 EANNSQHPVH HFIDDWPKYH QSDRASGSWP EELKSDWTQL SMSIPIAPDF SSSTGSPTHE 420 KSTLSTLRLS HEVDPTRMSL GVSHDLGQPV EKESPWSPIS WGNSMGGPLG EVLTSSTSGG 480 AGTSFSSVKH

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MDFGVLSHKQ NAGSLPSAEP RDEHGHESVN QRSQDCWKSH KILKPSQPDF SPKMASDAYA  60
AFGRSNLWPP PPDDGQKMLS FSSPAPPDAA ASARSIAFSI CQDQANAGNG GSGLRGSFSR  120
LKGPFTPSQW MDLEHQALIY KHIVANVPVP SNLLAPLKRS LYSYGSPASY ASNFLGWGGF  180
HLGFSGSNDP EPGRCRRTDG KKWRCSRDAV PDQKYCERHI NRGRHRSRKP VEGHTGHAVS  240
GSAASKVASV ASSSSASAMS TSNVSNSLSA MQHQLNSLQP NAASADHLVS RAQDVRGLSL  300
LPPTIGAKSK DAPYTIQKQH FPFEESSHLE FGSVSSDCLL NPSEKISYMN GSNSDSFNTK  360
EANNSQHPVH HFIDDWPKYH QSDRASGSWP EELKSDWTQL SMSIPIAPDF SSSTGSPTHE  420
KSTLSTLRLS HEVDPTRMSL GVSHDLGQPV EKESPWSPIS WGNSMGGPLG EVLTSSTSGG  480
AGTSFSSVKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-90	GRF family protein