PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71959.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 415aa MW: 46638.1 Da PI: 5.1379

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.2e-06	47	89	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 C+++++++++ C + ++ lC+dC ++H H+++ TEY71959.1 47 LCERCHSQPAITRCIQESTSLCQDCNWSGHAAvpasdveHKRE 89 7*****************************6688888888876 PP
2	CCT	66.8	6e-23	358	401	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a+lRYkeKrk+RkF+KkirY+sRK++A+ R+RvKGrFvk+ TEY71959.1 358 RDDAVLRYKEKRKSRKFDKKIRYASRKERADVRKRVKGRFVKAG 401 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MGRLCDFCGE QRSIIHCRSD AACLCLSCDR NVHSANAISK RHLRTLLCER CHSQPAITRC 60 IQESTSLCQD CNWSGHAAVP ASDVEHKREM INLYSGCPSA ADFSRIWSFF SVDKSISNPE 120 PDPMRLEERE ESPSRCELSH ADCCTEDTGI EIIAPDAVQF DGKGPLDSLN LKVICDLDIR 180 QSDSPAFMLF WLLLRLVEPS FMKASPPEKD PGPTHETPSQ NFYISDTELS LDDYEALFDE 240 SRDETQQFFD NGGADSFYGM RDMYDNECNV KGVTAKASSS KVGTLKQDCS NQLSVESMTS 300 CKSDSNDCVP RPAQSTHSIS FSGQTTKCNI GDLPENGGFS SVMMEEHQYD VQFSSAVRDD 360 AVLRYKEKRK SRKFDKKIRY ASRKERADVR KRVKGRFVKA GDPYDYDPLD LIKSQ

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MGRLCDFCGE QRSIIHCRSD AACLCLSCDR NVHSANAISK RHLRTLLCER CHSQPAITRC  60
IQESTSLCQD CNWSGHAAVP ASDVEHKREM INLYSGCPSA ADFSRIWSFF SVDKSISNPE  120
PDPMRLEERE ESPSRCELSH ADCCTEDTGI EIIAPDAVQF DGKGPLDSLN LKVICDLDIR  180
QSDSPAFMLF WLLLRLVEPS FMKASPPEKD PGPTHETPSQ NFYISDTELS LDDYEALFDE  240
SRDETQQFFD NGGADSFYGM RDMYDNECNV KGVTAKASSS KVGTLKQDCS NQLSVESMTS  300
CKSDSNDCVP RPAQSTHSIS FSGQTTKCNI GDLPENGGFS SVMMEEHQYD VQFSSAVRDD  360
AVLRYKEKRK SRKFDKKIRY ASRKERADVR KRVKGRFVKA GDPYDYDPLD LIKSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	4e-79	CO-like family protein