PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY71987.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 550aa    MW: 61153.6 Da    PI: 5.3508
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY71987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.21.5e-1241695501374
        GRAS   1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                 l++lLl+cAe vs+ d+           +a+a+++ l++++s +g+p qRl ay++e+L+arl++s+s +yk+l+++e +   s e ++++ +++++ P
  TEY71987.1 169 LKQLLLACAEIVSEADTIsmsdrqvaisAAEAMMEILEKNVSVSGEPAQRLGAYMLEGLRARLLSSGSIIYKKLKCKEPT---SLELMSYMGVLYQIVP 264
                 5799******99996653333344666699*************************************************9...99************** PP

        GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 ++kf+++  N  I ea+e+e+r+HiiDf+i qG QW++L+qaL+ Rp+gpp +RiTgv++++s   +   le +g++La++A+++gvpfefn  +a + 
  TEY71987.1 265 YYKFAYMSSNVIIGEAMENENRIHIIDFQIAQGSQWMSLIQALSRRPGGPPYIRITGVDDSDSAhaRGGGLELVGQKLAQLAQSCGVPFEFNG-AAMSG 362
                 ************************************************************8887889999***********************.8999* PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                  +++le+L+v++gEalaVn+ + lh+++desvs++++rd++L+l+kslsPk+v++veqe+++n+++F +rf+e+l+yy+a+f+s++a+ pr++++ri+ 
  TEY71987.1 363 CQVQLEHLKVRHGEALAVNFPYILHHMPDESVSTTNHRDRLLRLIKSLSPKIVTLVEQESNTNTSTFTQRFAETLDYYTAMFESIDAGRPRDDRQRINT 461
                 *************************************************************************************************** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                 E++++++++vn++aceg er+erhe ++kWr+rl +aGF++++ls ++ ++++ +lr+++s+ yr  e  +g+l+lgWk+rpL ++SaWr
  TEY71987.1 462 EEHCVAKDVVNIIACEGVERVERHEVFGKWRMRLAMAGFSQLRLSPSVSNSVRDMLREYSSN-YRSAELgDGALYLGWKNRPLATASAWR 550
                 ************************************************************88.888876588999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MQTYQTSASF QSFYNQPMQQ NDSYGSSTFQ ILNNDSTGSR SHGNEVSSQT YPDQFFTLES  60
TPAIDYATYS SPSAISVSSN RSPFSPQGSL SYASDLYQPS DNTYGSPLSG CSGVDDENKM  120
LHALWVLRNE LLGPESDTDD SGTFNGVVSQ PSPFTRYNRI LEMAPHMDLK QLLLACAEIV  180
SEADTISMSD RQVAISAAEA MMEILEKNVS VSGEPAQRLG AYMLEGLRAR LLSSGSIIYK  240
KLKCKEPTSL ELMSYMGVLY QIVPYYKFAY MSSNVIIGEA MENENRIHII DFQIAQGSQW  300
MSLIQALSRR PGGPPYIRIT GVDDSDSAHA RGGGLELVGQ KLAQLAQSCG VPFEFNGAAM  360
SGCQVQLEHL KVRHGEALAV NFPYILHHMP DESVSTTNHR DRLLRLIKSL SPKIVTLVEQ  420
ESNTNTSTFT QRFAETLDYY TAMFESIDAG RPRDDRQRIN TEEHCVAKDV VNIIACEGVE  480
RVERHEVFGK WRMRLAMAGF SQLRLSPSVS NSVRDMLREY SSNYRSAELG DGALYLGWKN  540
RPLATASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein