PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY72542.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 173aa    MW: 19435 Da    PI: 8.8788
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY72542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601231.6e-38161311100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal................peeeredamsslvyeAearardPvyGavgvilkl 83 
                 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l+                  pe++r da+ss+vyeA+ar+rdPvyG+vg i++l
  TEY72542.1  16 PCAACKLLRRRCAEDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQVHlnhlysflhklmkcelPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSL 114
                 7*******************************************99843333455555556666689999***************************** PP

      DUF260  84 qqqleqlkaelallkee 100
                 qqq++ l+++lal+++e
  TEY72542.1 115 QQQIDALQTQLALAQAE 131
                 ************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MKESSSSSRK QGAPAPCAAC KLLRRRCAED CVFAPYFPAD EPHKFANVHK VFGASNVNKM  60
LQVHLNHLYS FLHKLMKCEL PEHQRGDAVS SMVYEANARV RDPVYGCVGA ISSLQQQIDA  120
LQTQLALAQA EVVHMRMRQY SSSPDCASPS TRGRRSHNHH PKSSYNMDDS FWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.15e-60LBD family protein