PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY73808.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 191aa    MW: 21034.8 Da    PI: 7.699
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY73808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.72.3e-3981081100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dCv+apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq++ l+a++ ++k
  TEY73808.1   8 PCGACKFLRRKCAADCVFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPAADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQAQVMQAK 106
                 7*************************99*******************************************************************9999 PP

      DUF260  99 ee 100
                 ++
  TEY73808.1 107 AQ 108
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MASGSGSPCG ACKFLRRKCA ADCVFAPYFC SEQGPARFAA IHKVFGASNV SKLLLHVPAA  60
DRCEAVVTIA YEAQARIRDP VYGCVAHIFA LQQQVAYLQA QVMQAKAQLA QNVMRNGDQN  120
QWNCGAMGPF PAANYSNFYS SISPQSSLDS IDQQETQSRE DIEHYYTKKR PSQTDLSELQ  180
ALALRMINNQ D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.12e-54LBD family protein