PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY74435.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 353aa MW: 40159.5 Da PI: 8.1438

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY74435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.1	3.1e-25	73	165	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+++v++Li ++ ++++++++++ +kk++W++vs++m+ergf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d+++ TEY74435.1 73 KWTDNMVRLLIMVVFYIGDEVGAAEaggeggKKKGKWKSVSRAMMERGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtSCRVVENQSLLDSMD 165 7************9999999765555555******************************************669********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MLGLEMSLHH KLPPQNPQNP HHIPPPPQQR QGPMAALPYP KSKSQSLTLS DDDESGFAGE 60 DGKRRVSLWQ RMKWTDNMVR LLIMVVFYIG DEVGAAEAGG EGGKKKGKWK SVSRAMMERG 120 FYVSPQQCED KFNDLNKRYK RVNDILGKGT SCRVVENQSL LDSMDLAPKM CAYHYSCGGG 180 GAAQSHPIET HAAAEKTPNL NRGGGGEDGA KLRDEDEFEE EEQEDDVNEE RLSSRKRART 240 RTMMQLAQHL DAEMAREGGR TAGEKREWLK GKMVALEEER LGICSRSFQQ EKQRLKWLKC 300 SSKKEREMER EKLINERTKL ENERMLLLIR HRELDLMEHQ PANKKTDPSS ITG

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MLGLEMSLHH KLPPQNPQNP HHIPPPPQQR QGPMAALPYP KSKSQSLTLS DDDESGFAGE  60
DGKRRVSLWQ RMKWTDNMVR LLIMVVFYIG DEVGAAEAGG EGGKKKGKWK SVSRAMMERG  120
FYVSPQQCED KFNDLNKRYK RVNDILGKGT SCRVVENQSL LDSMDLAPKM CAYHYSCGGG  180
GAAQSHPIET HAAAEKTPNL NRGGGGEDGA KLRDEDEFEE EEQEDDVNEE RLSSRKRART  240
RTMMQLAQHL DAEMAREGGR TAGEKREWLK GKMVALEEER LGICSRSFQQ EKQRLKWLKC  300
SSKKEREMER EKLINERTKL ENERMLLLIR HRELDLMEHQ PANKKTDPSS ITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	6e-72	Trihelix family protein