PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY75249.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

YABBY

Protein Properties

Length: 202aa MW: 22697.1 Da PI: 10.0781

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY75249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	51	5.9e-16	6	56	5	55
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasq 55 se+vCy++C+fCnt+lav +P + l+ ++tv+CGhC++l ++ + +sq TEY75249.1 6 PVSENVCYIRCTFCNTVLAVGIPCKRLLDTLTVKCGHCSNLSFLSTKPQSQ 56 679*************************************97666655554 PP
2	YABBY	88.9	1.4e-27	64	129	100	161
YABBY 100 kl....senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWa 161 +l s++++ ++p+++ v++PPek+ r Psaynrf+keeiqrik++nP+i hreafsaaakn + TEY75249.1 64 SLssssSTSSEPSSPKAQFVVKPPEKKHRLPSAYNRFMKEEIQRIKTANPEIPHREAFSAAAKNVS 129 2222226777788899999*********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MDLAQPVSEN VCYIRCTFCN TVLAVGIPCK RLLDTLTVKC GHCSNLSFLS TKPQSQQAFK 60 KAPSLSSSSS TSSEPSSPKA QFVVKPPEKK HRLPSAYNRF MKEEIQRIKT ANPEIPHREA 120 FSAAAKNVSF MNENPKRLVS DEYFLWARYI PNHPRQTSTA STSINKLLSG LGISRESRAA 180 LERLIGRCSI RRSWTFWCPA EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-54	YABBY family protein