PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY75540.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 180aa MW: 20519.8 Da PI: 5.4151

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY75540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2e-10	18	64	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT eEd+++ d+ ++ + +W++Ia+++g ++++ ++ ++ ++ TEY75540.1 18 RWTWEEDKQFEDCLVDFPDDcadRWEKIAARLG-TKSAAEVERHYAML 64 9***************99*********.*********876 PP
2	Myb_DNA-binding	44.4	3.7e-14	106	150	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + + +G+g+Wk+I+r++ ++R + q+ s+ qk+ TEY75540.1 106 PWTEDEHRLFLLGLENYGKGDWKSISRYVVLTRNPTQVASHAQKH 150 8******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MANTSGSESD SAAADLPRWT WEEDKQFEDC LVDFPDDCAD RWEKIAARLG TKSAAEVERH 60 YAMLLEDVAA IEAGEIEPPA YVDQSSEPQP CPKSEKKQMG RKAGRPWTED EHRLFLLGLE 120 NYGKGDWKSI SRYVVLTRNP TQVASHAQKH FERQEREDQS KKRRSIFDSS ISQAKTKTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	9e-43	MYB family protein