PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY75612.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 251aa    MW: 28422.2 Da    PI: 9.8465
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY75612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.51.1e-101047239
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
                 ie++  r  t  kR++g++KK + L +LCd+ +++i 
  TEY75612.1 10 MIEEEKSRILTMKKRKKGLIKKLHQLTTLCDIPACMIF 47
                69999******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRSKLKMEM IEEEKSRILT MKKRKKGLIK KLHQLTTLCD IPACMIFRDP TTNSTSDWPE  60
EDPDQVRSLI EAYKAKKNDP SGGVREYLLS NFFDQRQRQA EEELEKLRKN NVEGMFPTWD  120
DRLNFMDEAQ LRELAATVRG KAENHNQQRR KERKHCGEGG GASSKAAMAD REALIGSRSQ  180
SRRNGAKAPW MPPEKETKKT TSGENTAGKE LNPRHNRMII DHCCKGSRAG DGQKMAGPVE  240
REEATAGGHV I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.11e-08M-type_MADS family protein