PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY76192.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 145aa MW: 15892.8 Da PI: 6.8945

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY76192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	137.5	4.7e-43	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C+++ yfpae+p+kfanvhk+FGasnv kll++l +++r+da++sl+yeAear+rdPvyG++g i+ lq+q+++l++el+++++ TEY76192.1 10 PCAACKFLRRKCMAGCIFSAYFPAEEPQKFANVHKIFGASNVGKLLHELLPHQRDDAVNSLAYEAEARVRDPVYGCIGAISFLQSQVDRLQKELDAANA 108 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MASSSSYNPP CAACKFLRRK CMAGCIFSAY FPAEEPQKFA NVHKIFGASN VGKLLHELLP 60 HQRDDAVNSL AYEAEARVRD PVYGCIGAIS FLQSQVDRLQ KELDAANADL VRFACNDNSQ 120 IGRNGVPWNH IYSNSYGGEG MDGSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	4e-68	LBD family protein