PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY76887.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 168aa MW: 18655 Da PI: 7.4048

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY76887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.4	1.2e-43	12	111	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dCv+apyfpae+p kfa vhk+FGasnv+k+l++l ee+r da+ss+vyeA+ar+rdPvyG+vg i+ lqqq++ l+++lal+++ TEY76887.1 12 PCAACKLLRRRCSRDCVFAPYFPAEEPGKFAGVHKVFGASNVSKMLQELAEEHRGDAVSSMVYEANARMRDPVYGCVGAISYLQQQIDGLRQQLALTQA 110 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY76887.1 111 E 111 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MEVSRKQNAS SPCAACKLLR RRCSRDCVFA PYFPAEEPGK FAGVHKVFGA SNVSKMLQEL 60 AEEHRGDAVS SMVYEANARM RDPVYGCVGA ISYLQQQIDG LRQQLALTQA EMLYLRVQQA 120 TSDQATSPNY SGSQLSYTFM SHSKPSSYDM EAGAVEHSTF RESMWSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	3e-61	LBD family protein