PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY76986.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 269aa MW: 30974.3 Da PI: 4.2956

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY76986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.8	1.2e-20	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++++LAkkl+L+ rqV vWFqNrRa++k TEY76986.1 64 KKRRLTPEQVHMLEKSFETENKLEPERKTQLAKKLNLQPRQVAVWFQNRRARWK 117 5678*************************************************9 PP
2	HD-ZIP_I/II	133.1	9.9e-43	63	154	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv++LE+sFe+e+kLeperK++la++L+lqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ ke+++L++el TEY76986.1 63 EKKRRLTPEQVHMLEKSFETENKLEPERKTQLAKKLNLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLLSNYDSILKENDKLKSELL 154 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MESGRIFFEP SCQNNMLFVN SHSGFRVGGR TVINMEESSK RRPFFSTTEE LYDDDYFDEQ 60 LPEKKRRLTP EQVHMLEKSF ETENKLEPER KTQLAKKLNL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDQLKS SYDSLLSNYD SILKENDKLK SELLSLTEKM KPEETAGEPG QKPEPVTEVD 180 AVQPCLELTV KVEDRLSIGS DGSAVVDDDG RQLLDSGDSY FPPDNDYPDC IAAVEGINSE 240 EDDGSDDGRS YFDVFAVEQQ EPIGWCIWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	7e-66	HD-ZIP family protein