PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY77955.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 219aa MW: 23296.2 Da PI: 9.4756

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY77955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00062	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F + L H +H TEY77955.1 82 YKCSVCNKTFGSYQALGGHKASH 104 9*********9999998888777 PP
2	zf-C2H2	13.6	0.0002	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F++ L H r+H TEY77955.1 133 HECTICHKRFPTGQALGGHKRRH 155 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MALQALNSPT TPAPPSFKLD NAATINYLEP WSKGKRSKRP RTSDHPTEEE YLALCLIMLA 60 RGGAASSPAA PPQKSLPPLA VYKCSVCNKT FGSYQALGGH KASHRKLTSG DGGDELSTAS 120 AVTTTSGAGG RVHECTICHK RFPTGQALGG HKRRHYDGSA AAASSSEGVG STVSHRDFDL 180 NLPAFPDQFW RRFGGEDEVE SPHPAKKARV SPPAELKFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	3e-53	C2H2 family protein