PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY78096.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 28291.4 Da PI: 8.2353

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY78096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.2	8.2e-32	52	101	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ TEY78096.1 52 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 101 79**********************************************95 PP
2	K-box	70.5	5.2e-24	103	166	35	98
K-box 35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 RhllGedL++Ls+keLq+Le+qLe +l++ R +K+++l+eq+eel++ke+el + nk+L+ k+ TEY78096.1 103 TRHLLGEDLGPLSIKELQNLEKQLEGALSQARLRKTQILVEQMEELRRKERELGDMNKQLKIKI 166 6***********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MFMCIYEGKE FSDTPYLFII NTSPHPIHTH SHTESDRERE REKMGRGRVE LKRIENKINR 60 QVTFSKRRNG LLKKAYELSV LCDAEVALII FSSRGKLYEF GSTRHLLGED LGPLSIKELQ 120 NLEKQLEGAL SQARLRKTQI LVEQMEELRR KERELGDMNK QLKIKISLEM SSLDAERQGL 180 RALPSPWTLT SSEASSFPLQ IQASNPMQME PEPFLQIGYH HYNLGEGPSA STRMAVDNNM 240 VQGWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	6e-69	MIKC_MADS family protein