PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY78101.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 205aa MW: 21531.5 Da PI: 6.8588

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY78101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	102.6	3.6e-32	16	106	1	90
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C aCk+lrrkC+++C++ap+f +eq +++fa+vhk+FGasnv+kll ++p e+r+da+ +++yeA+ar+rdPv + + i+ lq +l++l TEY78101.1 16 PCGACKFLRRKCVTGCIFAPHFDSEQgAAHFAAVHKVFGASNVSKLLLHVPVEKRPDAVITICYEAQARLRDPVVNLQAEISYLQAHLATL 106 7*********************9989***************************************************9999998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MSGSGGGGSS SGGGGPCGAC KFLRRKCVTG CIFAPHFDSE QGAAHFAAVH KVFGASNVSK 60 LLLHVPVEKR PDAVITICYE AQARLRDPVV NLQAEISYLQ AHLATLELPT PPPQPPSLLA 120 PPPPPPPPPL SIADLPAFSA VPATYDLPSL FDPTAWNLPH QSDTLTSQFP APRGGGDLQE 180 LAREFLARRE PCTNQPASPL PPHST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00220.1	1e-51	LBD family protein