PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY78916.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 191aa    MW: 21028.5 Da    PI: 6.4054
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY78916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.52.6e-3991091100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq +++f ++hk+FGasnv+kll++lp ++r +a+ +++yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  TEY78916.1   9 PCGACKFLRRKCVRGCVFAPYFCHEQgAAHFSAIHKVFGASNVSKLLAHLPISDRCEAAVTIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLK 107
                 7*************************89********************************************************************999 PP

      DUF260  99 ee 100
                 e+
  TEY78916.1 108 EQ 109
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MNMTGTGSPC GACKFLRRKC VRGCVFAPYF CHEQGAAHFS AIHKVFGASN VSKLLAHLPI  60
SDRCEAAVTI AYEAQARLQD PIYGCVSHIF ALQQQVVNLQ AQLASLKEQA AHSIATAANP  120
NADLQSWYQN QPQLESDFHG YFGGGAEINP DASSRNNQSF GSFDSGEMES EVRQWPFQDD  180
LESVAFRYIH H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.11e-58LBD family protein