PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY79275.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 180aa    MW: 20034.3 Da    PI: 6.2597
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY79275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.8e-052850123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C+k +++   L  H+++H
  TEY79275.1 28 YSCSFCNKEYKSAQALGGHMNVH 50
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MDRYSRDGAN LSFERDRAYG FSWPQRNYSC SFCNKEYKSA QALGGHMNVH RRDRARMRLS  60
PNPNPNPNPN PSLSLSSSAM PSTAKFLPCN VAHLAEVSSP SPPPPREDEL GATGFSSPRQ  120
SMGKCKNGDV EMLEFASFSR RNDVIRLDLS LGLMQDAKED SNSDLDMDLD LDLELRLGCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.17e-20C2H2 family protein