PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY80004.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 159aa    MW: 17715.2 Da    PI: 6.6094
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY80004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260119.32.2e-3771071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrr+C++dC++ pyf  eq +++f +vh++FGasnv+k+l +lp + r da++ ++yeA ar++dPvyG++++i++lqqq++ lk+e+++++
  TEY80004.1   7 SCGACKFLRRRCTPDCTFTPYFSYEQaASHFSAVHRVFGASNVSKMLLRLPLHSRGDAAAMICYEALARVHDPVYGCIAHIFALQQQVAVLKEEIETIE 105
                 6***********************9978*******************************************************************9987 PP

      DUF260  99 ee 100
                  +
  TEY80004.1 106 MQ 107
                 66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MTGASSSCGA CKFLRRRCTP DCTFTPYFSY EQAASHFSAV HRVFGASNVS KMLLRLPLHS  60
RGDAAAMICY EALARVHDPV YGCIAHIFAL QQQVAVLKEE IETIEMQMAS ARSLDPLAPT  120
QISAHVSVNQ TSCPNEMEQN AVQKLLQDIH QDYYLYQPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.13e-53LBD family protein