PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY80019.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 381aa MW: 41578.6 Da PI: 5.6658

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY80019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4.2e-15	21	66	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++ Ed l ++v+++G+++W++Ia+ + gR++k+c++rw + TEY80019.1 21 RGPWSAAEDAVLTELVNRFGPRNWSLIAAGIL-GRSGKSCRLRWCNQ 66 89***************************9.*********985 PP
2	Myb_DNA-binding	53.4	5.7e-17	73	117	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++a+k +G++ W++Ia+ ++ gRt++ +k++w++ TEY80019.1 73 RKPFTDEEDCAILEAHKVHGNK-WASIAKLLP-GRTDNAIKNHWNST 117 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEGERVEEAM EVGVEAGAKV RGPWSAAEDA VLTELVNRFG PRNWSLIAAG ILGRSGKSCR 60 LRWCNQLNPS LTRKPFTDEE DCAILEAHKV HGNKWASIAK LLPGRTDNAI KNHWNSTLRR 120 MHLKSTPESG QNCITEFTMG SSEATSSGPA LTLFNPSEEV DKWSMENQPK HSENEAETPT 180 NCTLEQPPPF LSNGVSKSLR CSETVESTMM ENELKQFKDV ARTTKSFGAR YNPSIAKAIS 240 HSAEGDHQKG SLPCNKVGAF TVCNSSICEA TFSRTVPGQG SLLLVQHEYD ILKFIDSKFD 300 EPLIPMRCGH GCCEASSRDS SLLGPEFKDY EESSNFSSPN LTSLATDLSS ITSIRRGLEN 360 AAEVRALASD QIANIGTSLC A

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEGERVEEAM EVGVEAGAKV RGPWSAAEDA VLTELVNRFG PRNWSLIAAG ILGRSGKSCR  60
LRWCNQLNPS LTRKPFTDEE DCAILEAHKV HGNKWASIAK LLPGRTDNAI KNHWNSTLRR  120
MHLKSTPESG QNCITEFTMG SSEATSSGPA LTLFNPSEEV DKWSMENQPK HSENEAETPT  180
NCTLEQPPPF LSNGVSKSLR CSETVESTMM ENELKQFKDV ARTTKSFGAR YNPSIAKAIS  240
HSAEGDHQKG SLPCNKVGAF TVCNSSICEA TFSRTVPGQG SLLLVQHEYD ILKFIDSKFD  300
EPLIPMRCGH GCCEASSRDS SLLGPEFKDY EESSNFSSPN LTSLATDLSS ITSIRRGLEN  360
AAEVRALASD QIANIGTSLC A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-71	MYB family protein