PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY80245.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 391aa MW: 42962.3 Da PI: 6.5658

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY80245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.6	8.6e-13	7	55	8	52
-HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 t+eq+e+ e+l + +++ps +r++L ++ +++ +q+kvWFqNrR TEY80245.1 7 TPEQVEAVERLHHDCPKPSSMRRQQLICECpilsNIEHKQIKVWFQNRR 55 89**********************************************9 PP
2	START	27.7	5.8e-10	59	118	2	61
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHH CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlall 61 +aee+++e+++ka+ ++ Wv+++ ++g++++ +++ s++++g a+ra+g+v +++ + TEY80245.1 59 IAEETLAEFLSKATGTAVEWVLMPGTKPGPDSIGTVAISHGCTGVAARACGLVGLEPTMV 118 7899*************************************************9988755 PP
3	START	63.6	6.1e-21	168	239	133	205
TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 133 eqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205 +++pp +++vRae+lp g+li+p+++g+s +++v+h +l++++++++lrsl++s+++ ++kt++a+l+++++ TEY80245.1 168 PSMPP-VQNFVRAEMLPGGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRSLYESSTVLAQKTTMAALRHLKQ 239 34555.79************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MLYVHDTPEQ VEAVERLHHD CPKPSSMRRQ QLICECPILS NIEHKQIKVW FQNRRLLSIA 60 EETLAEFLSK ATGTAVEWVL MPGTKPGPDS IGTVAISHGC TGVAARACGL VGLEPTMVIM 120 ISNTVFLGYS FCISSGWGLY NQKLLVIHAH NFGTRFVKDH SATLKNGPSM PPVQNFVRAE 180 MLPGGYLIRP CEGGGSIIHI VDHLNLEAWS VPEVLRSLYE SSTVLAQKTT MAALRHLKQM 240 AQDIPQTNIS NWGRRPAALQ ALGNRLSRSN YSQDSGFICI WLLIDEGWTL IGNDGMDDVT 300 ILVSSNPEKL MGFNIPFTNE YNSIFNANVP PAILLGFLRE HRSEWADNID TYAASAAKIG 360 PCTFLGTRVG NSGGQVILPL AQTIEHEEAS A

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MLYVHDTPEQ VEAVERLHHD CPKPSSMRRQ QLICECPILS NIEHKQIKVW FQNRRLLSIA  60
EETLAEFLSK ATGTAVEWVL MPGTKPGPDS IGTVAISHGC TGVAARACGL VGLEPTMVIM  120
ISNTVFLGYS FCISSGWGLY NQKLLVIHAH NFGTRFVKDH SATLKNGPSM PPVQNFVRAE  180
MLPGGYLIRP CEGGGSIIHI VDHLNLEAWS VPEVLRSLYE SSTVLAQKTT MAALRHLKQM  240
AQDIPQTNIS NWGRRPAALQ ALGNRLSRSN YSQDSGFICI WLLIDEGWTL IGNDGMDDVT  300
ILVSSNPEKL MGFNIPFTNE YNSIFNANVP PAILLGFLRE HRSEWADNID TYAASAAKIG  360
PCTFLGTRVG NSGGQVILPL AQTIEHEEAS A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52150.3	1e-130	HD-ZIP family protein