PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY82033.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 249aa    MW: 27500.1 Da    PI: 9.4881
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY82033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.22.1e-232773349
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 en+sn qvtfskRr+g++KKA+EL++LC+ae+a+++fs+ +k+y +
  TEY82033.1 27 MENHSNLQVTFSKRRAGLFKKASELCTLCGAEAAIVVFSPANKVYCF 73
                69******************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNSSSSSKQS APARKSKGRQ KVKMVKMENH SNLQVTFSKR RAGLFKKASE LCTLCGAEAA  60
IVVFSPANKV YCFGHPSVED VVDRLSAPPP PPPTHLLMEA HRNSNIRDLN IDLTRLETML  120
RSERARAGEI DRLREAGRHQ GWLPASLDGF DHAQLGALKE RVAGFKKELD DKVQKEMVRV  180
SETSQRLHCH SGDPSWTLSL GFDHLLPYST MSNEGYYHGW SGGGGHVFNG STDGASSSTL  240
PNHMFFPTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-42M-type_MADS family protein