PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY82149.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 236aa MW: 26209.2 Da PI: 6.8838

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY82149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	61.3	1.1e-19	4	49	6	51
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 + nr+ f+kRr+ ++ KA+EL vLCda++a+ii+ss+gk++++++ TEY82149.1 4 SENREAGFAKRRASLFNKAHELAVLCDAQIAIIIISSQGKVHDFAT 49 679*****************************************86 PP
2	K-box	16.3	3.9e-07	89	133	26	71
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 ++ ++L++ +l G+dL+ ++ +eL+ L ++L++++ i+++K + TEY82149.1 89 QKEDELKSR-QKLFGKDLSGMTSQELNGLVEKLKEGMLFIKDTKVN 133 555667766.89****************************999965 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MAKSENREAG FAKRRASLFN KAHELAVLCD AQIAIIIISS QGKVHDFATS SMQEILTRYK 60 TCNEIKNRNA NQENPEEEVP KEAGVSGQQK EDELKSRQKL FGKDLSGMTS QELNGLVEKL 120 KEGMLFIKDT KVNELQDFYA RVYYPLPISI HYPATERDRG LLPHANLSLA ITSSSEPEQH 180 ASNEPEKNAS NEISPPSTSS AEPKVSDCRS PTQHNPQQPA DKDSSKNHSG SKRNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-15	MIKC_MADS family protein