PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY82242.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 151aa MW: 16807.9 Da PI: 8.6131

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY82242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	149.2	1.1e-46	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpae+p+kfa vhk+FGasnv k+l++lpe++reda+sslvyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++ TEY82242.1 14 PCAACKLLRRRCAEDCVFAPYFPAEEPHKFASVHKVFGASNVNKMLQDLPEHQREDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQA 112 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY82242.1 113 E 113 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MKDSNSRKQG AASPCAACKL LRRRCAEDCV FAPYFPAEEP HKFASVHKVF GASNVNKMLQ 60 DLPEHQREDA VSSLVYEANA RVRDPVYGCV GAISSLQQQI DALQTQLALA QAEAVHMRMR 120 HYSSSAECAS PSTRGRRSHN HHPKSSESFW H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	5e-60	LBD family protein