PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY83417.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARR-B

Protein Properties

Length: 660aa MW: 73557.2 Da PI: 6.5864

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY83417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	6.9e-29	247	300	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl TEY83417.1 247 KPRVVWSVELHQQFVTAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 300 79*****************.******************************8 PP
2	Myb_DNA-binding	41.6	2.9e-13	249	299	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ TEY83417.1 249 RVVWSVELHQQFVTAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 299 678***********************************************7 PP
3	Response_reg	46.8	1.6e-16	34	100	1	66
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeir 66 vl+vdD+p+ +++l+++l+k y ev+++ +e al+ l++++ +D+++ D+ mp+mdG++ll++ TEY83417.1 34 VLVVDDDPTCLRILEKMLKKCFY-EVTTCNRAEVALNFLRDHKngCDIVISDVHMPDMDGFKLLEHVG 100 89*******************.***********999999*****************9874 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MDLGVKSTPY TSSNASWKST ADAVPGQFPA GLKVLVVDDD PTCLRILEKM LKKCFYEVTT 60 CNRAEVALNF LRDHKNGCDI VISDVHMPDM DGFKLLEHVG LEMDLPVISE CANLSATFLL 120 WLCFVSWFAM SGFDFWLVFL VMSADDSKHV VMKGVTHGAC DYLIKPVRIE ALKNIWQHVV 180 RKKQHELKDK DLEHSGSVEE GERQLKAYED TDCSHSANEG NWKNSKKRKD EEEDELEDRD 240 NTSALKKPRV VWSVELHQQF VTAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL 300 YLRRLSGVSQ HHNGLGSPFM GPTDAQFGQM SSINSVDLQA LAASGHIPHH SLASIQAAAL 360 GRATSKSPMP LPLVDQRNVF NFENPKLRFP EGQNESISKQ VNLLHGIPTN MDSKQLTSLH 420 QSALGNMNMH MHSQTSQSSS LMMQMAQLRP QTRPQNLNDI NGSRNGIEII SRPQYTSHPK 480 PSTSTDFSSQ GTEFSGNNTF PLPSNSGMSG AEMKGLRAFL PNYDILNNLN QSRNQEWRML 540 NAGSSFALLQ HSSIQRGLDV SSSLGESRIL SANKDTLSLV EGRDNTPNVS QQLNFPAFDK 600 SLRSKAERLP GMGFQNGLLN ERFGQEDLMS ALLKQQQEGM VAPVETEFGY DGYELDNLPV

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MDLGVKSTPY TSSNASWKST ADAVPGQFPA GLKVLVVDDD PTCLRILEKM LKKCFYEVTT  60
CNRAEVALNF LRDHKNGCDI VISDVHMPDM DGFKLLEHVG LEMDLPVISE CANLSATFLL  120
WLCFVSWFAM SGFDFWLVFL VMSADDSKHV VMKGVTHGAC DYLIKPVRIE ALKNIWQHVV  180
RKKQHELKDK DLEHSGSVEE GERQLKAYED TDCSHSANEG NWKNSKKRKD EEEDELEDRD  240
NTSALKKPRV VWSVELHQQF VTAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL  300
YLRRLSGVSQ HHNGLGSPFM GPTDAQFGQM SSINSVDLQA LAASGHIPHH SLASIQAAAL  360
GRATSKSPMP LPLVDQRNVF NFENPKLRFP EGQNESISKQ VNLLHGIPTN MDSKQLTSLH  420
QSALGNMNMH MHSQTSQSSS LMMQMAQLRP QTRPQNLNDI NGSRNGIEII SRPQYTSHPK  480
PSTSTDFSSQ GTEFSGNNTF PLPSNSGMSG AEMKGLRAFL PNYDILNNLN QSRNQEWRML  540
NAGSSFALLQ HSSIQRGLDV SSSLGESRIL SANKDTLSLV EGRDNTPNVS QQLNFPAFDK  600
SLRSKAERLP GMGFQNGLLN ERFGQEDLMS ALLKQQQEGM VAPVETEFGY DGYELDNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-155	ARR-B family protein