PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY83559.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family YABBY
Protein Properties Length: 122aa    MW: 13607.7 Da    PI: 9.0864
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY83559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY97.53.1e-3021225134
       YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103
                 + seq+ y+ CnfCn +lavsvP +sl+ vvtvrCGhC+sl +vn+a a+   +       s ++ ++ +  ++  ++k+     +  s+s+ ++k++ 
  TEY83559.1   2 DVSEQLRYIPCNFCNIVLAVSVPCSSLLDVVTVRCGHCSSLWTVNMAAAAFPPTQPPS---SCHHFQASNITTTPAEYKV-----DLGSSSKWNYKIQP 92 
                 579****************************************998877654443332...2223333344444443333.....33333333333333 PP

       YABBY 104 nedeevprvppvirPPekrqrvPsaynrfik 134
                 + + + p++  v+rPPekrqrvPsayn+fik
  TEY83559.1  93 SIS-KKPEPRIVNRPPEKRQRVPSAYNQFIK 122
                 222.234444699*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MDVSEQLRYI PCNFCNIVLA VSVPCSSLLD VVTVRCGHCS SLWTVNMAAA AFPPTQPPSS  60
CHHFQASNIT TTPAEYKVDL GSSSKWNYKI QPSISKKPEP RIVNRPPEKR QRVPSAYNQF  120
IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.13e-44YABBY family protein