PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY84430.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 384aa MW: 40405.6 Da PI: 7.6312

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY84430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.4	1.7e-40	82	182	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskk 99 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss s+ s +++ +s+ + TEY84430.1 82 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSRSSMSVPSQLRST---YF 177 789******************************************************************9997666666666655555333333...22 PP TCP 100 sqksa 104 +++ a TEY84430.1 178 NPSYA 182 22222 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MEGGDDHFHL HNHGHDHHHG RLNFPFQLLE KKEDESTSSP YPSLAISARA PSNPNYNSSA 60 SASASASSLQ IITAPEASKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG 120 HKSDGETIEW LLQQAEPSVI AATGTGTIPA NFTSLNISLR SSRSSMSVPS QLRSTYFNPS 180 YAMTSSPLHH HRRGSFFPGD PSPAAAAILN FPLAGGGLNP SFMTPAKEEA RENSIDLGEM 240 EDGGGIGRKR RAEQEQELGN YLLQSSNASA MAAASHTAAP ANFWMVANSS NMAAGVDPIW 300 TFPGVNSSSA TAAAALYRGS ASSGLHFMNF PGPIALLPSQ QLGGGEAQLG TLGGLGHYRA 360 GGMSDSQASG SHGGGGGDEN SHQS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MEGGDDHFHL HNHGHDHHHG RLNFPFQLLE KKEDESTSSP YPSLAISARA PSNPNYNSSA  60
SASASASSLQ IITAPEASKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG  120
HKSDGETIEW LLQQAEPSVI AATGTGTIPA NFTSLNISLR SSRSSMSVPS QLRSTYFNPS  180
YAMTSSPLHH HRRGSFFPGD PSPAAAAILN FPLAGGGLNP SFMTPAKEEA RENSIDLGEM  240
EDGGGIGRKR RAEQEQELGN YLLQSSNASA MAAASHTAAP ANFWMVANSS NMAAGVDPIW  300
TFPGVNSSSA TAAAALYRGS ASSGLHFMNF PGPIALLPSQ QLGGGEAQLG TLGGLGHYRA  360
GGMSDSQASG SHGGGGGDEN SHQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	3e-53	TCP family protein