PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY85456.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 774aa MW: 85695.7 Da PI: 6.8316

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY85456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117.3	7.7e-37	128	204	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv+gCead+se+k yh+rh+vC ++++a+vv+++g+++r+CqqC++fh ls+fDe+krsCrr+L+khn+rrr+k++ TEY85456.1 128 CQVPGCEADISELKGYHKRHRVCLQCAHAAVVVLDGESKRYCQQCGKFHLLSNFDEGKRSCRRKLEKHNDRRRRKSN 204 *************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 774 aa Download sequence
MEHNSPPPIP SPVYLPSTAA DPTESALFDW SDFLDFDIDE AINTPFAISE PGSGLEQEPG 60 SDQSQQSESL GRVRKRDPRL LCPNFVAGVV PCACPELDKK LEEEEESALP GKKRTRAVRP 120 PAAGPLLCQV PGCEADISEL KGYHKRHRVC LQCAHAAVVV LDGESKRYCQ QCGKFHLLSN 180 FDEGKRSCRR KLEKHNDRRR RKSNETRGGT DKEPQQVVLV DDVKEDDDGG KDGASPSSQI 240 EEKEILLKSD GHVSAVSSDP DSQGFLGERV APFPVPGEIH INGHKHSPNS KRAASYSDNF 300 SSVCPTGRIS FKLYDWNPAE FPRRLRLQIF EWLASMPVEL EGYIRPGCTI LTAFIAMPKP 360 MWLKLLDKPA SCIKDLIGSP GSMLSGKGTM LVYVNDMIFR VTKDAHSVVP VSIKDKSPKL 420 HYIYPTCFEA GRQMEFVACG SDLLQAKFRF LVSCDGRYLA YKICVSSLCC KKGETNYFNH 480 QLVKISVPET DMNLSGPAFI EVENQSGLSN FIPIFFGDKE TCEEMEILQR TFDTSTSSQE 540 QPASLSRPEC GVLVSRQTRF SGFLLDLGWS LKKPVSGKSL TSSDAQRFNY LLDFLIEKGP 600 SIILERVFRS LESSLDKTDV AEVSDSDMRS LQTKMGIVRL MLDHRTQDRS SATTSASDGN 660 VQHQSKDGRF VVQASATKTE KLDDIPSARE ASSLDAVAAT APLINKEVVM NVNIHYRPQK 720 SPSLMSSRTF LTLRPLMTAV AAVCICLGVC VALLHPQKVD QIATTIRRCL FDNP

Sequence ? help Back to Top

Protein Sequence Length: 774 aa Download sequence

MEHNSPPPIP SPVYLPSTAA DPTESALFDW SDFLDFDIDE AINTPFAISE PGSGLEQEPG  60
SDQSQQSESL GRVRKRDPRL LCPNFVAGVV PCACPELDKK LEEEEESALP GKKRTRAVRP  120
PAAGPLLCQV PGCEADISEL KGYHKRHRVC LQCAHAAVVV LDGESKRYCQ QCGKFHLLSN  180
FDEGKRSCRR KLEKHNDRRR RKSNETRGGT DKEPQQVVLV DDVKEDDDGG KDGASPSSQI  240
EEKEILLKSD GHVSAVSSDP DSQGFLGERV APFPVPGEIH INGHKHSPNS KRAASYSDNF  300
SSVCPTGRIS FKLYDWNPAE FPRRLRLQIF EWLASMPVEL EGYIRPGCTI LTAFIAMPKP  360
MWLKLLDKPA SCIKDLIGSP GSMLSGKGTM LVYVNDMIFR VTKDAHSVVP VSIKDKSPKL  420
HYIYPTCFEA GRQMEFVACG SDLLQAKFRF LVSCDGRYLA YKICVSSLCC KKGETNYFNH  480
QLVKISVPET DMNLSGPAFI EVENQSGLSN FIPIFFGDKE TCEEMEILQR TFDTSTSSQE  540
QPASLSRPEC GVLVSRQTRF SGFLLDLGWS LKKPVSGKSL TSSDAQRFNY LLDFLIEKGP  600
SIILERVFRS LESSLDKTDV AEVSDSDMRS LQTKMGIVRL MLDHRTQDRS SATTSASDGN  660
VQHQSKDGRF VVQASATKTE KLDDIPSARE ASSLDAVAAT APLINKEVVM NVNIHYRPQK  720
SPSLMSSRTF LTLRPLMTAV AAVCICLGVC VALLHPQKVD QIATTIRRCL FDNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	GKKRTRA
2	189	201	RRKLEKHNDRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein