PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85546.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 244aa    MW: 27766.8 Da    PI: 9.4936
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.64.3e-151149341
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                i +++ r+ tf +R+  ++KKA+ELSvLC++e+ +i+  
  TEY85546.1 11 ILSERVRKSTFKRRLDSLFKKAHELSVLCGVEIVIIVND 49
                6678899*****************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MPRQKTKHTQ ILSERVRKST FKRRLDSLFK KAHELSVLCG VEIVIIVNDP KESHSTLWPS  60
HDQVMNGVMK FMARSKEPGP KKMVLHDKFL SDKLKSMTDR LLKLQKKNDE TEMGFLMTRL  120
FEGGIFNELG VRQLNGLDQF VEEKLKMLEN RYNELAGAQG QLMCTNNLHH SQMTPATAEN  180
RIGNFATNSI TEEDIRFGPG IQNTFGMSRG IDLGSSEVAR SFTNWNQGGV PDEFGSAWPT  240
NFYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.18e-20M-type_MADS family protein