PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85547.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 227aa    MW: 26025 Da    PI: 9.9266
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.12.7e-141152344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i +++ r+ tf +R+  ++KKA+EL vLC++e+ +i+ +++ 
  TEY85547.1 11 ILSERVRNSTFKRRLDSLFKKAHELLVLCGVEIVIIVNGPKE 52
                66788899*****************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MPRQKTKHTQ ILSERVRNST FKRRLDSLFK KAHELLVLCG VEIVIIVNGP KESHSTLWPS  60
HDQVMNGVMK FMARSKEPGP KKVVLHDKFL SDKLKSMTDR LLKLQKKNDE TEMGFLMTRL  120
FEGGIFNELD VRQLNGLDQF VEEKLKKLEN RYNELAGALA QHIQMTTENR SGDIAATSIT  180
EEGIWFGPGI QNTFGMSRGI NLESTAVTRS FVDWNEIGRV WPTTFYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.12e-18M-type_MADS family protein