PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85556.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 241aa    MW: 25747.6 Da    PI: 7.7289
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.13.4e-39331331100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +++fa+vhk+FGasnv+kll ++pe++r d++ +++yeA+ r+rdP++G+v++i++lqqq+ +l++el++l+
  TEY85556.1  33 PCGACKFLRRKCVPECVFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPESRRLDTVITVCYEAQSRLRDPIHGCVAHIFNLQQQVVNLQQELSYLQ 131
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  TEY85556.1 132 AH 133
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MKTLLIVDLI LTGMSSGNVA GSGSAAAAGG GGPCGACKFL RRKCVPECVF APYFDSEQGA  60
AHFAAVHKVF GASNVSKLLL HIPESRRLDT VITVCYEAQS RLRDPIHGCV AHIFNLQQQV  120
VNLQQELSYL QAHIAAMHLP APPPLQQQQQ LLVPVSQAIL DFSPIPVAYD LSTVVAPQSS  180
WSLYPRQQIE QRQFSNTATP VAVGVGGGCD LQELARELLN RLAPPTVGCS NQASSLPHKS  240
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.15e-55LBD family protein