PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85646.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LSD
Protein Properties Length: 175aa    MW: 19166.5 Da    PI: 7.4274
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD142.79e-142145125
     zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                C+gCr lL+YP GA++V+CalC+ V
  TEY85646.1 21 CSGCRSLLMYPSGATNVCCALCNSV 45
                ***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MLLISHFSDD KRRGMQSQVV CSGCRSLLMY PSGATNVCCA LCNSVTTIPP QEPPNAAIHI  60
FKHSLGVLSI DHLASVLCCA IISLIHVGRW EMLGSHFPCI GQLDLPLQHR CLLVQRLVLI  120
FDHVFLEPEC FSNYGSMQPL PNPQSQTVVV ENPMSVDKSG KLVSNVVVGV TTDKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20380.23e-20LSD family protein