PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY85652.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 171aa MW: 19595.3 Da PI: 10.4463

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY85652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.5	6.4e-20	67	121	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t++q++ Le+ F+++ ++++++++ LA+kl+L+ rqV vWFqNrRa+ k TEY85652.1 67 RKKLRLTRDQTTLLEDSFREHTTLNTAQKQSLAEKLNLKPRQVEVWFQNRRARSK 121 678899***********************************************98 PP
2	HD-ZIP_I/II	117.3	8.8e-38	67	158	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+++q +lLE+sF+e+++L++ +K++la++L+l+prqv+vWFqnrRAR k+kq+E+++e+Lk+++++l++en+rL++ev eLr++lk TEY85652.1 67 RKKLRLTRDQTTLLEDSFREHTTLNTAQKQSLAEKLNLKPRQVEVWFQNRRARSKLKQTEVECEVLKKNCERLTDENRRLKREVLELRSSLK 158 69**************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MDNGDGNVCL GLGLGLGFSP KREVPQNKNN NNKRLLVFDL SIPIHPNNSH DKKDDDRDVN 60 FSMSYGRKKL RLTRDQTTLL EDSFREHTTL NTAQKQSLAE KLNLKPRQVE VWFQNRRARS 120 KLKQTEVECE VLKKNCERLT DENRRLKREV LELRSSLKIG KPAAAAATPS L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	124	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-41	HD-ZIP family protein