PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY85671.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 510aa    MW: 56663.9 Da    PI: 7.1549
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY85671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS220.21.1e-671425032373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  + Ll+ Ae vs+++  +a +lL+  ++ + ++ + ++Rl+ yf eAL  ++ar   e+ +  + ++t+e+n + +++ l +f++  P +++++++  q
  TEY85671.1 142 LQDLLSSAEKVSNQQYVAAGKLLSLCHNFSFSQSNVIRRLVYYFSEALLDKIAR---ETGRFNEETKTREMNPVVSASGLAAFHQKVPPIQVTQFAGVQ 237
                 689*********************99999*************************...5555556666666667888888888***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                  +   v+++++vHiiD+d+   l+ + L+qaLas++ ++  + +iT+v+ ++       e+ g +L+++A++l+++f+f+++   +l+d+   + r+++
  TEY85671.1 238 ELIGHVSSSKKVHIIDLDMRCELHHVILMQALASKNeSSLKHYKITAVVLSS--GLMLAEAAGVNLKNLANSLNLSFSFHLI---KLDDMLKLQKRCDS 331
                 ***********************************955667*********44..67777899*******************8...4444433355899* PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E+++V  + +l+ +  ++ +les    +++++k+++P v++v+e e + ns+ F++rf+eal yy a fd++e  l + + +r +vE  l+g++++  
  TEY85671.1 332 DEKTVVYASNALKFMIVRPNQLES----LIRFIKNTNPCVMIVCEPEGNVNSPVFVNRFVEALFYYGAYFDCVEDCLKNVAVDREFVESNLFGPSLRTT 426
                 ***************988888888....*********************************************************************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                 v +eg+err r      Wr+ ++++G+ + +ls++a + a+l l++++ +d  ++e + +sl+  Wk+ ++ s+SaW
  TEY85671.1 427 VGAEGEERRSRIVGIDVWRAFFTKFGMMEKELSSSALDHARLSLKMFDcGDSCTLELNGKSLIVQWKGTAICSLSAW 503
                 ***************************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MSTGDQFCTF QAYKASPDYE EVTFLSNGGG LNDLPLDIVS PPKSQQHEEK SYAFFPSASL  60
EILRNNYTSK MSKPGGKSLH CLGAQNLPSP TPLSTNDIIE LAAINFIKSN TNARGELSAL  120
SHPYASAFIG ITSDHVADLQ LLQDLLSSAE KVSNQQYVAA GKLLSLCHNF SFSQSNVIRR  180
LVYYFSEALL DKIARETGRF NEETKTREMN PVVSASGLAA FHQKVPPIQV TQFAGVQELI  240
GHVSSSKKVH IIDLDMRCEL HHVILMQALA SKNESSLKHY KITAVVLSSG LMLAEAAGVN  300
LKNLANSLNL SFSFHLIKLD DMLKLQKRCD SDEKTVVYAS NALKFMIVRP NQLESLIRFI  360
KNTNPCVMIV CEPEGNVNSP VFVNRFVEAL FYYGAYFDCV EDCLKNVAVD REFVESNLFG  420
PSLRTTVGAE GEERRSRIVG IDVWRAFFTK FGMMEKELSS SALDHARLSL KMFDCGDSCT  480
LELNGKSLIV QWKGTAICSL SAWIFHKYRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-28GRAS family protein