PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY85672.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 419aa MW: 47699.3 Da PI: 6.1941

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY85672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	37	4.7e-12	122	190	1	69
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppset 69 lv+ Ll+cA+avs++++ +a+++L++ s+l+s + + mqRl+ yf e L r++ ++ + +pp ++ TEY85672.1 122 LVQDLLSCAQAVSNHNNDCASEFLKEFSKLSSGSTNVMQRLVYYFSESLCDRILPVNTRPLELIPPISD 190 6899*************************************************9955555555544443 PP
2	GRAS	85	1.2e-26	230	405	182	363
GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280 +++++ dl+ + Lr +p+E+++V+ ++ l + + + + ++ +v+sl+P+v++++e ea+ +s+ F++rf+eal ++ a fd le+ l + TEY85672.1 230 HVQDILDLNQSILRPDPEETVVVQAAHILRFMI----PEP---EILMLAVRSLNPHVMIIIEVEANVDSKVFVNRFAEALLFFGAGFDYLEQCLKDDLA 321 56788899999************99777776....222...246679******************************************9999 PP GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgWk 363 +r+ E +l++++i+ +va+e++er+ r + Wr + ++ + + +ls+ + + a+++l++++ +g r+ + +sl+ gW+ TEY85672.1 322 ARNYAEFVLFSPSIRHIVAAEEEERKFRIVGINFWRGGFVRFVMAETELSKLVLNHANSVLNMFDCRGsCRLVLDGNSLIVGWR 405 ***************************************************************77769***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MYSSSKALER ENHVQTYSFQ GDESICESDL LFYEELPTHF AALDDLYLDK ACSSNEPRDW 60 QPSPQGEKAI CISLCSHGDY RETRRRATAN GHPLQRKDFH HSAVIYPNRA TFSRSKSEDI 120 RLVQDLLSCA QAVSNHNNDC ASEFLKEFSK LSSGSTNVMQ RLVYYFSESL CDRILPVNTR 180 PLELIPPISD TASLIEKLPF NQVMQFAGVQ TMSGCPVQHL KITAVAAQSH VQDILDLNQS 240 ILRPDPEETV VVQAAHILRF MIPEPEILML AVRSLNPHVM IIIEVEANVD SKVFVNRFAE 300 ALLFFGAGFD YLEQCLKDDL AARNYAEFVL FSPSIRHIVA AEEEERKFRI VGINFWRGGF 360 VRFVMAETEL SKLVLNHANS VLNMFDCRGS CRLVLDGNSL IVGWRIHQYF HYLHGSFRR

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MYSSSKALER ENHVQTYSFQ GDESICESDL LFYEELPTHF AALDDLYLDK ACSSNEPRDW  60
QPSPQGEKAI CISLCSHGDY RETRRRATAN GHPLQRKDFH HSAVIYPNRA TFSRSKSEDI  120
RLVQDLLSCA QAVSNHNNDC ASEFLKEFSK LSSGSTNVMQ RLVYYFSESL CDRILPVNTR  180
PLELIPPISD TASLIEKLPF NQVMQFAGVQ TMSGCPVQHL KITAVAAQSH VQDILDLNQS  240
ILRPDPEETV VVQAAHILRF MIPEPEILML AVRSLNPHVM IIIEVEANVD SKVFVNRFAE  300
ALLFFGAGFD YLEQCLKDDL AARNYAEFVL FSPSIRHIVA AEEEERKFRI VGINFWRGGF  360
VRFVMAETEL SKLVLNHANS VLNMFDCRGS CRLVLDGNSL IVGWRIHQYF HYLHGSFRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14920.1	6e-12	GRAS family protein