PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY86142.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 520aa    MW: 58131.8 Da    PI: 6.6745
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY86142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS468.83e-143965171374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v+sg+le+a+ +L ++s+laspdgd+mqR+a+yf eALa r++r ++++yka+++++ +    +ee++++k+f+e  P++k+++++ N
  TEY86142.1  96 LIHLLITCANHVASGSLENANIALDQISHLASPDGDTMQRIASYFSEALADRILRAWPGVYKAFRSTRMP--VLAEEIHVRKMFFEFLPFMKVAFVISN 192
                 689*************************************************************999998..69************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vH+iD+++++++QW aL++ L++Rpegpp+lRiTgv++    ++e le+t++ L + Ae+l++pf+f++ v+++ledl++e+Lrvk+
  TEY86142.1 193 QAIIEAMEGEKMVHVIDLNATEPTQWCALIRDLSARPEGPPHLRITGVHQ----KREVLEQTAHVLIEEAEKLDLPFQFHP-VVSKLEDLDVEKLRVKT 286
                 **************************************************....9**************************.799************** PP

        GRAS 199 gEalaVnlvlqlhrll.......................................................desvsleserdevLklvkslsPkvvvvv 242
                 gEala+++++qlh+ll                                                        +s++++ ++d  L+++++lsPkv+vv+
  TEY86142.1 287 GEALAISSIMQLHTLLacdaggnrsplapmkgvgvqfqraahtnqgtlgellekdmvngyspsidspssspLSSMPSSPKIDGYLSALWGLSPKVMVVT 385
                 ******************************************************************998884444444469****************** PP

        GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                 eq++dhn++s++er++e+l++y+alfd+le+ lpr+s er k+E++l+g+ei+n++aceg err+rhe+lekW++r+e aGF++vpls++a+ qak+ll
  TEY86142.1 386 EQDSDHNGKSLMERLSESLYFYAALFDCLESALPRASIERLKMEKMLFGEEIKNIIACEGGERRQRHERLEKWNQRFELAGFGNVPLSYYAMLQAKRLL 484
                 *************************************************************************************************** PP

        GRAS 342 rkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + ++ dgy+++e++g++v++W+drpL+svSaWr
  TEY86142.1 485 QSYNCDGYKIKEDNGCVVICWQDRPLLSVSAWR 517
                 ********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MGTCSHKNSI FLQLAPDKIS PHLNFASFQS NSGNSIAESS LRIIKLPAFA LMFQDDGSSS  60
VTSSPLQMFP TPSPPSLISP YPWLKDLKPE ERGLYLIHLL ITCANHVASG SLENANIALD  120
QISHLASPDG DTMQRIASYF SEALADRILR AWPGVYKAFR STRMPVLAEE IHVRKMFFEF  180
LPFMKVAFVI SNQAIIEAME GEKMVHVIDL NATEPTQWCA LIRDLSARPE GPPHLRITGV  240
HQKREVLEQT AHVLIEEAEK LDLPFQFHPV VSKLEDLDVE KLRVKTGEAL AISSIMQLHT  300
LLACDAGGNR SPLAPMKGVG VQFQRAAHTN QGTLGELLEK DMVNGYSPSI DSPSSSPLSS  360
MPSSPKIDGY LSALWGLSPK VMVVTEQDSD HNGKSLMERL SESLYFYAAL FDCLESALPR  420
ASIERLKMEK MLFGEEIKNI IACEGGERRQ RHERLEKWNQ RFELAGFGNV PLSYYAMLQA  480
KRLLQSYNCD GYKIKEDNGC VVICWQDRPL LSVSAWRNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein